For programming-related questions related to Bioinformatics.
Suppose I have a DNA sequence. I want to get the complement of it. I used the following code but …
r replace bioinformatics genetics complementI'm trying to implement the Smith-Waterman algorithm for local sequence alignment using the affine gap penalty function. I think I …
python bioinformatics biopython sequence-alignmentIm trying to extract only the first hit from an NCBI xml BLAST file. next I would like to get …
python xml bioinformatics elementtree ncbiI almost have my needleman-wunsch implementation working but I am confused on how to handle the traceback on a specific …
python algorithm dynamic-programming bioinformaticsThe description of the problem I am having is a bit complicated, and I will err on the side of …
python performance io bioinformatics fastaNew to coding. New to Pytho/biopython; this is my first question online, ever. How do I open a compressed …
python bioinformatics biopython gzip