Top "Imagej" questions

ImageJ is a Java-based open-source image processing program that is used extensively in scientific image analysis, particularly life sciences.

How to merge different stacks together in ImageJ?

I'm trying to find out a way to merge two stacks together. For example I'm taking some 60X images about …

merge alignment imagej stack
How can I use ImageJ as a library for a separate Java application?

In a regular Java application, I have a BufferedImage that I would like to manipulate with ImageJ. I have a …

java image-processing imagej
ImageJ Brightness & Contrast over a stack of images

I'm looking through a dataset set of images in ImageJ (a stack of .tif images, about 130 frames), and I have …

java image-processing imagej
ImageJ macro make new folder and save output in new folder

I modified the following macro I found on an ImageJ message board to batch split channels, create a new folder …

imagej imagej-macro
How to connect ImageJ to python?

I am using Python to design a software, and the image processing is one of the steps. I am using …

python jython imagej
Automatically release unused memory in ImageJ / Fiji

I use Fiji/ImageJ on Windows and encountered the following problem: when I close a file, the memory allocated for …

imagej
Twain device (scanner) control in Java

I want to scan a number of papers through Java. I found the mm's computing twain library. When I run …

java twain image-scanner imagej
Crop Custom Shape in ImageJ or equivalent (TIFF video file)

I have a .tiff video file with growing fibers that look like the image below Now imagine that this fiber …

image-processing tiff imagej imagej-macro
imageJ how to get pixel rgb value?

i have a simple plugin which saves the polygon coordinates: Roi roi = imp.getRoi(); Polygon p = roi.getPolygon(); for (int …

java imagej
ImageJ Overlay Stacks

Basically what I am trying to achieve is overlay one stack with another, in a layer that maybe displayed or …

java imagej