Top "Biopython" questions

Running BLAST queries with BioPython

I would like to BLAST several sequences Retrieve the top 100 hits or so from each query Pool the downloaded sequences …

bioinformatics biopython sequences blast

Why can't python find some modules when I'm running CGI scripts from the web?

I have no idea what could be the problem here: I have some modules from Biopython which I can import …

python cgi bioinformatics biopython

Installation of biopython - python 3.3 not found in registry

I am trying to install biopython to run with Python 3.3 on a Windows7 computer. I have downloaded the biopython executable …

python windows-7 registry biopython

how to download complete genome sequence in biopython entrez.esearch

I have to download only complete genome sequences from NCBI (GenBank(full) format). I am intrested in 'complete geneome' not …

python download biopython

Traceback in Smith-Wateman algorithm with affine gap penalty

I'm trying to implement the Smith-Waterman algorithm for local sequence alignment using the affine gap penalty function. I think I …

python bioinformatics biopython sequence-alignment

SeqIO.parse on a fasta.gz

New to coding. New to Pytho/biopython; this is my first question online, ever. How do I open a compressed …

python bioinformatics biopython gzip