Top "Vegan" questions

RDA, Error in colMeans(x, na.rm = TRUE) : 'x' must be numeric, when data is numeric?

I want to perform a rda in R, using vegan. My code looks like this: species<- read.delim("…

r vegan rda

Plotting envfit vectors (vegan package) in ggplot2

I am working on finalizing a NMDS plot that I created in vegan and ggplot2 but cannot figure out how …

r ggplot2 vegan

Plotting ordiellipse function from vegan package onto NMDS plot created in ggplot2

Instead of the normal plot function I am using ggplot2 to create NMDS plots. I would like to display groups …

r ggplot2 vegan

Plotting RDA (vegan) in ggplot

I'm still new to R, trying to learn how to use the library vegan, which I can easily plot in …

r ggplot2 pca vegan

accumulation curve in R

I have data of species at 4 sites over several months. I have successfully created accumulation graphs using package vegan in …

r plot vegan

Error when performing an NMDS in R using package vegdist

I'm trying to perform an NMDS in R using the vegan package on a data set that has plots as …

r error-handling vegan vegdist

Bray-Curtis Pairwise Analysis in R

I am trying to calculate and visualize the Bray-Curtis dissimilarity between communities at paired/pooled sites using the Vegan package …

r vegan

how to interpret cca vegan output

I have performed a canonical correspondece analysis in R using the vegan package but i find the output very difficult …

r vegan

"Error in G * t(hat) : non-conformable arrays" error in adonis(), in Vegan , in R

ANSWERED: A single NA value in any column in either data.frame can cause this error. I have a rather …

arrays r vegan