How to generate distributions given, mean, SD, skew and kurtosis in R?

Aaron B picture Aaron B · Jan 26, 2011 · Viewed 44.9k times · Source

Is it possible to generate distributions in R for which the Mean, SD, skew and kurtosis are known? So far it appears the best route would be to create random numbers and transform them accordingly. If there is a package tailored to generating specific distributions which could be adapted, I have not yet found it. Thanks

Answer

JD Long picture JD Long · Jan 26, 2011

There is a Johnson distribution in the SuppDists package. Johnson will give you a distribution that matches either moments or quantiles. Others comments are correct that 4 moments does not a distribution make. But Johnson will certainly try.

Here's an example of fitting a Johnson to some sample data:

require(SuppDists)

## make a weird dist with Kurtosis and Skew
a <- rnorm( 5000, 0, 2 )
b <- rnorm( 1000, -2, 4 )
c <- rnorm( 3000,  4, 4 )
babyGotKurtosis <- c( a, b, c )
hist( babyGotKurtosis , freq=FALSE)

## Fit a Johnson distribution to the data
## TODO: Insert Johnson joke here
parms<-JohnsonFit(babyGotKurtosis, moment="find")

## Print out the parameters 
sJohnson(parms)

## add the Johnson function to the histogram
plot(function(x)dJohnson(x,parms), -20, 20, add=TRUE, col="red")

The final plot looks like this:

enter image description here

You can see a bit of the issue that others point out about how 4 moments do not fully capture a distribution.

Good luck!

EDIT As Hadley pointed out in the comments, the Johnson fit looks off. I did a quick test and fit the Johnson distribution using moment="quant" which fits the Johnson distribution using 5 quantiles instead of the 4 moments. The results look much better:

parms<-JohnsonFit(babyGotKurtosis, moment="quant")
plot(function(x)dJohnson(x,parms), -20, 20, add=TRUE, col="red")

Which produces the following:

enter image description here

Anyone have any ideas why Johnson seems biased when fit using moments?