Top "Hdf5" questions

The Hierarchical Data Format (HDF5) is a binary file format designed to store large amount of numerical data.

Discovering keys using h5py in python3

In python2.7, I can analyze an hdf5 files keys use $ python >>> import h5py >>> …

python-2.7 python-3.4 hdf5
g++ compile error: undefined reference to a shared library function which exists

I recently installed the hdf5 library on an ubuntu machine, and am now having trouble linking to the exported functions. …

g++ shared-libraries ld hdf5 undefined-reference
hdf5 file to pandas dataframe

I downloaded a dataset which is stored in .h5 files. I need to keep only certain columns and to be …

python pandas hdf5
Storing a list of strings to a HDF5 Dataset from Python

I am trying to store a variable length list of string to a HDF5 Dataset. The code for this is …

python hdf5 h5py
Incremental writes to hdf5 with h5py

I have got a question about how best to write to hdf5 files with python / h5py. I have data …

python hdf5 h5py
matplotlib - 3d surface from a rectangular array of heights

I am trying to plot some HDF data in matplotlib. After importing them using h5py, the data is stored …

python matplotlib 3d hdf5 geometry-surface
HDF5 Example code

Using HDF5DotNet, can anyone point me at example code, which will open an hdf5 file, extract the contents of …

c# hdf5
Opinions on NetCDF vs HDF5 for storing scientific data?

Anyone out there have enough experience w/ NetCDF and HDF5 to give some pluses / minuses about them as a way …

hdf5 netcdf
how to export HDF5 file to NumPy using H5PY?

I have an existing hdf5 file with three arrays, i want to extract one of the arrays using h5py.

python numpy hdf5 h5py
Close an open h5py data file

In our lab we store our data in hdf5 files trough the python package h5py. At the beginning of …

python ipython hdf5 h5py