In the example ggbiplot script plot there are 3 groups, how can I change the marker colors and shapes?
library(ggbiplot)
data(wine)
wine.pca <- prcomp(wine, scale. = TRUE)
ggbiplot(wine.pca, obs.scale = 1, var.scale = 1, group=wine.class,
varname.size = 3, labels.size=3,
ellipse = TRUE, circle = TRUE) +
scale_color_discrete(name = '') +
geom_point(aes(colour=wine.class), size = 3) +
theme(legend.direction ='horizontal',
legend.position = 'top')
The following works for me.
ggbiplot(wine.pca, obs.scale = 1, var.scale = 1, group=wine.class,
varname.size = 3, labels.size=3, ellipse = TRUE, circle = TRUE) +
scale_color_manual(name="Variety", values=c("orange", "purple", "green")) +
scale_shape_manual(name="Variety", values=c(17:19)) +
geom_point(aes(colour=wine.class, shape=wine.class), size = 3) +
theme(legend.direction ="horizontal",
legend.position = "top")
For the legend, the trick seems to be to use the same name
for scale_color_manual
and scale_shape_manual
.