I'd like to plot a horizontal facet-wide line with the population median of that facet.
I tried the approach without creating a dummy summary table with the following code:
require(ggplot2)
dt = data.frame(gr = rep(1:2, each = 500),
id = rep(1:5, 2, each = 100),
y = c(rnorm(500, mean = 0, sd = 1), rnorm(500, mean = 1, sd = 2)))
ggplot(dt, aes(x = as.factor(id), y = y)) +
geom_boxplot() +
facet_wrap(~ gr) +
geom_hline(aes(yintercept = median(y), group = gr), colour = 'red')
However, the line is drawn for the median of the entire dataset instead of the median separately for each facet:
In the past, a solution has been suggested to use
geom_line(stat = "hline", yintercept = "median")
but it's been discontinued (produces the error "No stat called StatHline").
Another solution suggested
geom_errorbar(aes(ymax=..y.., ymin=..y.., y = mean))
but it generates
Error in data.frame(y = function (x, ...) :
arguments imply differing number of rows: 0, 1000
Finally, there's a way to plot the median by creating a dummy table with the desired stats but I'd like to avoid it.
You could create an extra column in dt
for median per facet.
library(dplyr) # With dplyr for example
dt <- dt %>% group_by(gr) %>%
mutate(med = median(y))
# Rerun ggplot line with yintercept = med
ggplot(dt, aes(x = as.factor(id), y = y)) +
geom_boxplot() +
facet_wrap(~ gr) +
geom_hline(aes(yintercept = med, group = gr), colour = 'red')