Let's say I have the following string:
s <- "ID=MIMAT0027618;Alias=MIMAT0027618;Name=hsa-miR-6859-5p;Derives_from=MI0022705"
I would like to recover the strings between ";"
and "="
to get the following output:
[1] "MIMAT0027618" "MIMAT0027618" "hsa-miR-6859-5p" "MI0022705"
Can I use strsplit()
with more than one split element?
1) strsplit with matrix Try this:
> matrix(strsplit(s, "[;=]")[[1]], 2)[2,]
[1] "MIMAT0027618" "MIMAT0027618" "hsa-miR-6859-5p" "MI0022705"
2) strsplit with gsub or this use of strsplit
with gsub
:
> strsplit(gsub("[^=;]+=", "", s), ";")[[1]]
[1] "MIMAT0027618" "MIMAT0027618" "hsa-miR-6859-5p" "MI0022705"
3) strsplit with sub or this use of strsplit
with sub
:
> sub(".*=", "", strsplit(s, ";")[[1]])
[1] "MIMAT0027618" "MIMAT0027618" "hsa-miR-6859-5p" "MI0022705"
4) strapplyc or this which extracts consecutive non-semicolons after equal signs:
> library(gsubfn)
> strapplyc(s, "=([^;]+)", simplify = unlist)
[1] "MIMAT0027618" "MIMAT0027618" "hsa-miR-6859-5p" "MI0022705"
ADDED additional strplit
solutions.