Read a UTF-8 text file with BOM

djhurio picture djhurio · Feb 7, 2014 · Viewed 15.6k times · Source

I have a text file with Byte order mark (U+FEFF) at the beginning. I am trying to read the file in R. Is it possible to avoid the Byte order mark?

The function fread (from the data.table package) reads the file, but adds ļ»æ at the beginning of the first variable name:

> names(frame_pers)[1]
[1] "ļ»æreg_date"

The same is with read.csv function.

Currently I have made a function which removes the BOM from the first column name, but I believe there should be a way how to automatically strip the BOM.

remove.BOM <- function(x) setnames(x, 1, substring(names(x)[1], 4))

> names(frame_pers)[1]
[1] "ļ»æreg_date"
> remove.BOM(frame_pers)
> names(frame_pers)[1]
[1] "reg_date"

I am using the native encoding for the R session:

> options("encoding" = "")
> options("encoding")
$encoding
[1] ""

Answer

hadley picture hadley · Feb 11, 2014

Have you tried read.csv(..., fileEncoding = "UTF-8-BOM")?. ?file says:

As from R 3.0.0 the encoding ‘"UTF-8-BOM"’ is accepted and will remove a Byte Order Mark if present (which it often is for files and webpages generated by Microsoft applications).