I have several ggplots as objects on my ls. I want to save them as separate files (although I would also be interested to know how to save them all under 1 big file). I have read this: question and question but I can't seem to adapt the code. I also tried to plot them all in one big file as suggested here but do get this error: Error in do.call("grid.arrange", plots2[[i]]) : second argument must be a list
. There's something that I am missing in getting all the ggplots in one list.
This is what I've tried so far:
> ls() #List of objects on my ls. All the p* are my ggplots that I want to save.
[1] "all" "dat" "dat2" "dat3" "data" "dlook" "dlook2" "dlook3" "i" "look2" "mdfx"
[12] "objects" "order" "p" "p1" "p10" "p11" "p12" "p13" "p14" "p15" "p16"
[23] "p17" "p18" "p19" "p2" "p3" "p4" "p5" "p6" "p7" "p8" "p9"
> objects<-ls()
> plot<-objects[14:30]
> plots
[1] "p1" "p10" "p11" "p12" "p13" "p14" "p15" "p16" "p17" "p18" "p19" "p2" "p3" "p4" "p5" "p6" "p7" "p8" "p9"
> class(plots)
[1] "character"
plots2<-as.list(plots)#Transform into a list.
library(gridExtra) #Code suggested to create one pdf file.
pdf("test.pdf", onefile = TRUE)
for (i in seq(length(plots2))) {
do.call("grid.arrange", plots2[[i]])
}
dev.off()
it's best to have your plots in a list
l = mget(plots)
Then you can simply print them page-by-page,
pdf("all.pdf")
invisible(lapply(l, print))
dev.off()
or save one plot per file,
invisible(mapply(ggsave, file=paste0("plot-", names(l), ".pdf"), plot=l))
or arrange them all in one page,
ggsave("arrange.pdf", arrangeGrob(grobs = l))
or arrange them 2x2 in multiple pages,
ggsave("arrange2x2.pdf", marrangeGrob(grobs = l, nrow=2, ncol=2))
etc.
(untested)