I'm trying to apply a function to a group of columns in a large data.table without referring to each one individually.
a <- data.table(
a=as.character(rnorm(5)),
b=as.character(rnorm(5)),
c=as.character(rnorm(5)),
d=as.character(rnorm(5))
)
b <- c('a','b','c','d')
with the MWE above, this:
a[,b=as.numeric(b),with=F]
works, but this:
a[,b[2:3]:=data.table(as.numeric(b[2:3])),with=F]
doesn't work. What is the correct way to apply the as.numeric
function to just columns 2 and 3 of a
without referring to them individually.
(In the actual data set there are tens of columns so it would be impractical)
The idiomatic approach is to use .SD
and .SDcols
You can force the RHS to be evaluated in the parent frame by wrapping in ()
a[, (b) := lapply(.SD, as.numeric), .SDcols = b]
For columns 2:3
a[, 2:3 := lapply(.SD, as.numeric), .SDcols = 2:3]
or
mysubset <- 2:3
a[, (mysubset) := lapply(.SD, as.numeric), .SDcols = mysubset]