Error in <my code> : object of type 'closure' is not subsettable

user1496289 picture user1496289 · Jul 3, 2012 · Viewed 419.2k times · Source

I was finally able to work out the code for my scraping. It seemed to be working fine and then all of a sudden when I ran it again, I got the following error message:

Error in url[i] = paste("http://en.wikipedia.org/wiki/", gsub(" ", "_",  : 
  object of type 'closure' is not subsettable

I am not sure why as I changed nothing in my code.

Please advise.

library(XML)
library(plyr)

names <- c("George Clooney", "Kevin Costner", "George Bush", "Amar Shanghavi")

for(i in 1:length(names)) {
    url[i] = paste('http://en.wikipedia.org/wiki/', gsub(" ","_", names[i]) , sep="")

    # some parsing code
}

Answer

Richie Cotton picture Richie Cotton · Jul 3, 2012

In general this error message means that you have tried to use indexing on a function. You can reproduce this error message with, for example

mean[1]
## Error in mean[1] : object of type 'closure' is not subsettable
mean[[1]]
## Error in mean[[1]] : object of type 'closure' is not subsettable
mean$a
## Error in mean$a : object of type 'closure' is not subsettable

The closure mentioned in the error message is (loosely) the function and the environment that stores the variables when the function is called.


In this specific case, as Joshua mentioned, you are trying to access the url function as a variable. If you define a variable named url, then the error goes away.

As a matter of good practise, you should usually avoid naming variables after base-R functions. (Calling variables data is a common source of this error.)


There are several related errors for trying to subset operators or keywords.

`+`[1]
## Error in `+`[1] : object of type 'builtin' is not subsettable
`if`[1]
## Error in `if`[1] : object of type 'special' is not subsettable

If you're running into this problem in shiny, the most likely cause is that you're trying to work with a reactive expression without calling it as a function using parentheses.

library(shiny)
reactive_df <- reactive({
    data.frame(col1 = c(1,2,3),
               col2 = c(4,5,6))
})

While we often work with reactive expressions in shiny as if they were data frames, they are actually functions that return data frames (or other objects).

isolate({
    print(reactive_df())
    print(reactive_df()$col1)
})
  col1 col2
1    1    4
2    2    5
3    3    6
[1] 1 2 3

But if we try to subset it without parentheses, then we're actually trying to index a function, and we get an error:

isolate(
    reactive_df$col1
)
Error in reactive_df$col1 : object of type 'closure' is not subsettable