I am trying to pass BioPython sequences to Ilya Stepanov's implementation of Ukkonen's suffix tree algorithm in iPython's notebook environment. I am stumbling on the argparse component.
I have never had to deal directly with argparse before. How can I …
Problem:
I need all the sequences of characters that meet the following:
Sequence of characters must be present more than once ((LE, 1) is thus invalid).
Sequence of characters must be longer than one character ((M, 2) is thus invalid).
Sequence of …