I can not for the life of me figure out how to switch the image ordering. images are read in (x,x,3) format, theano requires it to be in (3,x,x) format. I tried changing the order with
numpy.array([img[:,:,i] for i in range(3)])
which i guess gets the job done, but it is both ugly and i can't figure out how to reverse it to get the original image back.
You can use numpy.rollaxis to roll the axis 3 to position 1 (considering you have the batch size as dimension 0).
np.rollaxis(imagesArray, 3, 1)
But, if you're using keras, you might want to change its configuration or define it per layer. Theano doesn't require anything from you if you're using Keras.
Keras can be configured with channels first or channels last, besides allowing you to define it in every individual layer, so you don't have to change your data.
Find the keras.json
file and change it. The file is usually installed in C:\Users\yourusername\.keras
or ~/.keras
depending on your OS.
Change "image_data_format": "channels_last"
to "channels_first"
or vice-versa, as you wish.
Usually, working with "channels_last" is less troublesome because of a great amount of other (non convolutional) functions that work only on the last axis.
The Keras documentation has all information about parameters for layers, including the data_format
parameter.