I am getting the following error when importing
import geopandas as gpd
---------------------------------------------------------------------------
ImportError Traceback (most recent call last)
<ipython-input-3-f8b81fe8ca07> in <module>()
----> 1 import geopandas as gpd
//anaconda/lib/python2.7/site-packages/geopandas/__init__.py in <module>()
2 from geopandas.geodataframe import GeoDataFrame
3
----> 4 from geopandas.io.file import read_file
5 from geopandas.io.sql import read_postgis
6 from geopandas.tools import sjoin
//anaconda/lib/python2.7/site-packages/geopandas/io/file.py in <module>()
1 import os
2
----> 3 import fiona
4 import numpy as np
5 from shapely.geometry import mapping
//anaconda/lib/python2.7/site-packages/fiona/__init__.py in <module>()
67 from six import string_types
68
---> 69 from fiona.collection import Collection, BytesCollection, vsi_path
70 from fiona._drivers import driver_count, GDALEnv
71 from fiona.drvsupport import supported_drivers
//anaconda/lib/python2.7/site-packages/fiona/collection.py in <module>()
6 import warnings
7
----> 8 from fiona import compat
9 from fiona.ogrext import Iterator, ItemsIterator, KeysIterator
10 from fiona.ogrext import Session, WritingSession
ImportError: cannot import name compat
I have installed geoPandas using anaconda however when I am trying to run it is displaying me the above error. When running
conda list
I am getting
After the runnning of the following:
conda install -c conda-forge fiona shapely pyproj rtree
conda install pandas
conda install -c conda-forge geopandas
I am getting
---------------------------------------------------------------------------
ImportError Traceback (most recent call last)
<ipython-input-2-f8b81fe8ca07> in <module>()
----> 1 import geopandas as gpd
//anaconda/lib/python2.7/site-packages/geopandas/__init__.pyc in <module>()
2 from geopandas.geodataframe import GeoDataFrame
3
----> 4 from geopandas.io.file import read_file
5 from geopandas.io.sql import read_postgis
6 from geopandas.tools import sjoin
//anaconda/lib/python2.7/site-packages/geopandas/io/file.py in <module>()
1 import os
2
----> 3 import fiona
4 import numpy as np
5 from shapely.geometry import mapping
//anaconda/lib/python2.7/site-packages/fiona/__init__.py in <module>()
67 from six import string_types
68
---> 69 from fiona.collection import Collection, BytesCollection, vsi_path
70 from fiona._drivers import driver_count, GDALEnv
71 from fiona.drvsupport import supported_drivers
//anaconda/lib/python2.7/site-packages/fiona/collection.py in <module>()
7
8 from fiona import compat
----> 9 from fiona.ogrext import Iterator, ItemsIterator, KeysIterator
10 from fiona.ogrext import Session, WritingSession
11 from fiona.ogrext import (
ImportError: dlopen(//anaconda/lib/python2.7/site-packages/fiona/ogrext.so,
2): Library not loaded: @rpath/libnetcdf.11.dylib
Referenced from: //anaconda/lib/libgdal.20.dylib
Reason: Incompatible library version: libgdal.20.dylib requires version
12.0.0 or later, but libnetcdf.11.dylib provides version 11.0.0
The problem is caused by incompatibility of the fiona's and gdal's dependencies. Uninstall geopandas via conda. It will uninstall fiona as well.
Do conda uninstall geopandas
;
Do conda install fiona=1.6
Do conda search fiona
before hand and see if it is available for your version of python. If not, create new environment for that version of python.(Ex. create -n py35 python=3.5 anaconda
)
Then pip install geopandas
Finally, try to import geopandas
and see if you still get the error.