I have a list of lists that looks something like this:
data = [['seq1', 'ACTAGACCCTAG'],
['sequence287653', 'ACTAGNACTGGG'],
['s9', 'ACTAGAAACTAG']]
I write the information to a file like this:
for i in data:
for j in i:
file.write('\t')
file.write(j)
file.write('\n')
The output looks like this:
seq1 ACTAGACCCTAG
sequence287653 ACTAGNACTGGG
s9 ACTAGAAACTAG
The columns don't line up neatly because of variation in the length of the first element in each internal list. How can I write appropriate amounts of whitespace between the first and second elements to make the second column line up for human readability?
You need a format string:
for i,j in data:
file.write('%-15s %s\n' % (i,j))
%-15s
means left justify a 15-space field for a string. Here's the output:
seq1 ACTAGACCCTAG
sequence287653 ACTAGNACTGGG
s9 ACTAGAAACTAG