ImportError HDFStore requires PyTables No module named tables
import pandas as pd
dfs = pd.HDFStore('xxxxx.h5')
throws this error:
"ImportError: HDFStore requires PyTables, "No module named tables" problem importing"
I tried to install PyTables, which Requires Cython. I have Cython 0.21 installed, but it is throwing an error stating that Cython should be greater than 0.13
Here is the log that I am getting:
".. ERROR:: You need Cython 0.13 or greater to compile PyTables!
----------------------------------------
Cleaning up...
Command python setup.py egg_info failed with error code 1 in /private/tmp/pip_build_root/tables
Storing debug log for failure in /Users/nikhilsahai/Library/Logs/pip.log
Nikhils-MacBook-Pro:~ nikhilsahai$ sudo pip install cython
Requirement already satisfied (use --upgrade to upgrade): cython in /Library/Python/2.7/site-packages/Cython-0.21-py2.7-macosx-10.9-intel.egg
Cleaning up..."
Please guide me how to do solve this issue.
Answer
Simply updating pytables with:
pip install --upgrade tables
worked for me.