Ambiguity in Pandas Dataframe / Numpy Array "axis" definition

Question

I've been very confused about how python axes are defined, and whether they refer to a DataFrame's rows or columns. Consider the code below:

>>> df = pd.DataFrame([[1, 1, 1, 1], [2, 2, 2, 2], [3, 3, 3, 3]], columns=["col1", "col2", "col3", "col4"])
>>> df
   col1  col2  col3  col4
0     1     1     1     1
1     2     2     2     2
2     3     3     3     3

So if we call df.mean(axis=1), we'll get a mean across the rows:

>>> df.mean(axis=1)
0    1
1    2
2    3

However, if we call df.drop(name, axis=1), we actually drop a column, not a row:

>>> df.drop("col4", axis=1)
   col1  col2  col3
0     1     1     1
1     2     2     2
2     3     3     3

Can someone help me understand what is meant by an "axis" in pandas/numpy/scipy?

A side note, DataFrame.mean just might be defined wrong. It says in the documentation for DataFrame.mean that axis=1 is supposed to mean a mean over the columns, not the rows...

Answer 1

It's perhaps simplest to remember it as 0=down and 1=across.

This means:

• Use axis=0 to apply a method down each column, or to the row labels (the index).
• Use axis=1 to apply a method across each row, or to the column labels.

Here's a picture to show the parts of a DataFrame that each axis refers to:

It's also useful to remember that Pandas follows NumPy's use of the word axis. The usage is explained in NumPy's glossary of terms:

Axes are defined for arrays with more than one dimension. A 2-dimensional array has two corresponding axes: the first running vertically downwards across rows (axis 0), and the second running horizontally across columns (axis 1). [my emphasis]

So, concerning the method in the question, df.mean(axis=1), seems to be correctly defined. It takes the mean of entries horizontally across columns, that is, along each individual row. On the other hand, df.mean(axis=0) would be an operation acting vertically downwards across rows.

Similarly, df.drop(name, axis=1) refers to an action on column labels, because they intuitively go across the horizontal axis. Specifying axis=0 would make the method act on rows instead.