I want to run a bash script in my ipython Notebook and save the output as a string in a python variable for further manipulation. Basically I want to pipe the output of the bash magic to a variable, For example the output of something like this:
%%bash
some_command [options] foo bar
What about using this:
myvar = !some_command --option1 --option2 foo bar
instead of the %%bash
magic? Using the !
symbol runs the following command as a shell command, and the results are all stored in myvar
. For running multiple commands and collecting the output of all of them, just put together a quick shell script.