keras predict is very slow
I am working on a reinforcement learning task and decided to use keras NN model for Q value approximation. The approach is common: after each action the reward is stored in a memory replay array, then I take random sample from it and fit the model with new data state-action => reward+predicted_Q(more details here). In order to do the training the Q value has to be predicted for each item in the training set.
The script is running very slow so I started investigating. Profiling shows that 56,87% of cumulative time is taken by _predict_loop method:
And it looks strange, cause prediction is just a one-way propagation. Just a one-time multiplication of set of numbers. The model I am using is very simple: 8 inputs, 5 nodes on hidden layer, 1 output.
I have installed and configured CUDA, run few example tests and it shows that GPU is used, also I can see huge load of GPU. When I run my code - there is a message: "Using gpu device 0: GeForce GT 730" but I can see that GPU load is really low(about 10%).
Is it normal for predict function to take so much time? Is there a way to use GPU for this computation?
Answer
It seems the size of your NN is much too small to fully utilize the GPU. Typically GPU is faster than multi-core CPU only when the input/hidden/output layer size is larger than 200~500 (depending on the implementation code).
However the size of your NN is only 8/5/1, which means most of the time is spent on GPU overhead such CUDA kernel launching, PCIe data transfer, etc. In this case, the number of calls is the main factor that determines the training time. To speed up, you probably need to train your model on CPU, and with a programming language such as C/C++ that has much lower overhead.