The theory from these links show that the order of Convolutional Network is: Convolutional Layer - Non-linear Activation - Pooling Layer
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But, in the last implementation from those sites, it said that the order is: Convolutional Layer - Pooling Layer - Non-linear Activation
I've tried too to explore a Conv2D operation syntax, but there is no activation function, it's only convolution with flipped kernel. Can someone help me to explain why is this happen?
Well, max-pooling and monotonely increasing non-linearities commute. This means that MaxPool(Relu(x)) = Relu(MaxPool(x)) for any input. So the result is the same in that case. So it is technically better to first subsample through max-pooling and then apply the non-linearity (if it is costly, such as the sigmoid). In practice it is often done the other way round - it doesn't seem to change much in performance.
As for conv2D, it does not flip the kernel. It implements exactly the definition of convolution. This is a linear operation, so you have to add the non-linearity yourself in the next step, e.g. theano.tensor.nnet.relu
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