On my computer I have Ubuntu 10.10 with gcc 4.4.4. I try to compile some mex files which use CUDA and I get following error message:
>> cns_build('hmax')
compiling...
/home/leMe/hmax/cns/source/common_dec.h(54): warning: omission of exception specification is incompatible with previous function "operator new(size_t)"
/usr/include/c++/4.4/new(91): here
/home/leMe/hmax/cns/source/common_dec.h(55): warning: omission of exception specification is incompatible with previous function "operator new[](size_t)"
/usr/include/c++/4.4/new(92): here
/home/leMe/hmax/cns/source/common_dec.h(56): warning: omission of exception specification is incompatible with previous function "operator delete(void *)"
/usr/include/c++/4.4/new(93): here
/home/leMe/hmax/cns/source/common_dec.h(57): warning: omission of exception specification is incompatible with previous function "operator delete[](void *)"
/usr/include/c++/4.4/new(94): here
Segmentation fault
CUDA preprocessing [nvcc] failed
Warning: You are using gcc version "4.4.4-14ubuntu5)". The version
currently supported with MEX is "4.2.3".
For a list of currently supported compilers see:
http://www.mathworks.com/support/compilers/current_release/
CPU compilation successful
I assume by linking Matlab with gcc 4.2.3 I can get rid of the error, but I don't know how to do it.
mex -setup
gives me following options:
1: /home/leMe/Matlab/bin/gccopts.sh :
Template Options file for building gcc MEX-files
2: /home/leMe/Matlab/bin/mexopts.sh :
Template Options file for building MEX-files via the system ANSI compiler
I solved it by changing my mexopts.sh file
, in ~/matlab/R2009b/mexopts.sh
(change with your matlab version)
Find your architecture (for me it's glnxa64
), and change it like this:
;;
glnxa64) #<----------------------- FIND THIS
RPATH="-Wl,-rpath-link,$TMW_ROOT/bin/$Arch"
# StorageVersion: 1.0
# CkeyName: GNU C
# CkeyManufacturer: GNU
# CkeyLanguage: C
# CkeyVersion:
CC='gcc-4.1' #<---------------------------------- CHANGE HERE
CFLAGS='-ansi -D_GNU_SOURCE'
CFLAGS="$CFLAGS -fexceptions"
CFLAGS="$CFLAGS -fPIC -fno-omit-frame-pointer -pthread"
CLIBS="$RPATH $MLIBS -lm"
COPTIMFLAGS='-O -DNDEBUG'
CDEBUGFLAGS='-g'
CLIBS="$CLIBS -lstdc++"
#
# C++keyName: GNU C++
# C++keyManufacturer: GNU
# C++keyLanguage: C++
# C++keyVersion:
CXX='g++-4.1' #<---------------------------------- CHANGE HERE
CXXFLAGS='-ansi -D_GNU_SOURCE'
CXXFLAGS="$CXXFLAGS -fPIC -fno-omit-frame-pointer -pthread"
CXXLIBS="$RPATH $MLIBS -lm"
CXXOPTIMFLAGS='-O -DNDEBUG'
CXXDEBUGFLAGS='-g'
PS: you also need to install the right version of gcc