How to normalize a histogram in MATLAB?

edgarmtze picture edgarmtze · Mar 16, 2011 · Viewed 209.8k times · Source

How to normalize a histogram such that the area under the probability density function is equal to 1?

Answer

abcd picture abcd · Mar 16, 2011

My answer to this is the same as in an answer to your earlier question. For a probability density function, the integral over the entire space is 1. Dividing by the sum will not give you the correct density. To get the right density, you must divide by the area. To illustrate my point, try the following example.

[f, x] = hist(randn(10000, 1), 50); % Create histogram from a normal distribution.
g = 1 / sqrt(2 * pi) * exp(-0.5 * x .^ 2); % pdf of the normal distribution

% METHOD 1: DIVIDE BY SUM
figure(1)
bar(x, f / sum(f)); hold on
plot(x, g, 'r'); hold off

% METHOD 2: DIVIDE BY AREA
figure(2)
bar(x, f / trapz(x, f)); hold on
plot(x, g, 'r'); hold off

You can see for yourself which method agrees with the correct answer (red curve).

enter image description here

Another method (more straightforward than method 2) to normalize the histogram is to divide by sum(f * dx) which expresses the integral of the probability density function, i.e.

% METHOD 3: DIVIDE BY AREA USING sum()
figure(3)
dx = diff(x(1:2))
bar(x, f / sum(f * dx)); hold on
plot(x, g, 'r'); hold off