I am not sure why "which java" and "whereis java" paths are not correct. I tried to edit ~/.bash_profile and /etc/environment but did not help. The desired path is what is seen in "echo $JAVA_HOME" below but the same is not reflected in "which java"
Below is what I get in CentOS 6.4:
which java
/usr/bin/java
java -version
java version "1.7.0_45"
JAVA(TM) SE Runtime Environment (build 1.7.0_45-b18)
JAVA HotSpot (TM) 64-bit Server VM (build 24.45-b08, mixed mode)
whereis java
java: /usr/bin/java /etc/java /usr/lib/java /usr/share/java
echo $JAVA_HOME
/usr/java/jdk1.7.0_45/jre => desired shows correct when echo $JAVA_HOME
Your PATH (and nothing else) determines which directories to look for commands. This is the same in Linux, Solaris, and DOS.
When you do a which {command}
it find the first directory you can execute the command in.
When you update your PATH in .bashrc
, you have to source it again to change your current settings.