I have an issue where my css3 transformations are effecting other elements on the page and even causing them to sort of flicker. I saw another post about this but they didn't have a resolution with the issue.
http://scosha.mybigcommerce.com/w107b/ when you scroll over the navigation you see an animated css3 transformation. It works fine in firefox without flickering but with chrome and safari the effect is very obvious, you see it in the drop down menu items as well as the footer text.
Working solution for flickering elements during transition in Chrome is to set up CSS for parent node:
-webkit-backface-visibility: hidden;