Duplicate Package - update / upgrade - Centos

centos duplicates centos7 yum
Justin picture Justin · Oct 17, 2013 · Viewed 54.5k times · Source

When I try running yum update on a CentOS 6.3 box, I am getting errors, and says to run yum check. The output of yum check is:

➜  ~  yum check
Loaded plugins: fastestmirror
glibc-2.12-1.107.el6_4.5.x86_64 is a duplicate with glibc-2.12-1.107.el6_4.4.x86_64
glibc-common-2.12-1.107.el6_4.5.x86_64 is a duplicate with glibc-common-2.12-1.107.el6_4.4.x86_64
glibc-devel-2.12-1.107.el6_4.5.x86_64 is a duplicate with glibc-devel-2.12-1.107.el6_4.4.x86_64
glibc-devel-2.12-1.107.el6_4.5.x86_64 has missing requires of glibc-headers = ('0', '2.12', '1.107.el6_4.5')
iputils-20071127-17.el6_4.2.x86_64 is a duplicate with iputils-20071127-17.el6_4.x86_64
nspr-4.9.5-2.el6_4.x86_64 is a duplicate with nspr-4.9.2-1.el6.x86_64
nss-3.14.3-4.el6_4.x86_64 is a duplicate with nss-3.14.0.0-12.el6.x86_64
nss-softokn-3.14.3-3.el6_4.x86_64 is a duplicate with nss-softokn-3.12.9-11.el6.x86_64
nss-util-3.14.3-3.el6_4.x86_64 is a duplicate with nss-util-3.14.0.0-2.el6.x86_64
tzdata-2013g-1.el6.noarch is a duplicate with tzdata-2013c-2.el6.noarch
2:xinetd-2.3.14-39.el6_4.x86_64 is a duplicate with 2:xinetd-2.3.14-38.el6.x86_64
Error: check all

Any idea how to fix these packages? I tried yum reinstall xinetd tzdata nss-util nss-softokn nss nspr iputils glibc glibc-common glibc-devel but got:

Error: Multilib version problems found. This often means that the root cause is something else and multilib version checking is just pointing out that there is a problem.

Answer

user1403360 picture user1403360 · Dec 4, 2013

For me it looks like you rebooted your computer (or it crashed) while you where in the process of upgrading packages. So new packages where installed, but old packages where not removed.

First look if you have any uncomplete transactions with: yum-complete-transaction

If this doesn't help then take a look at the package-cleanup tool which is part of the yum-utils package.

package-cleanup --dupes lists duplicate packages

package-cleanup --cleandupes removes duplicate packages

But be carefull with the command and create a backup before removing duplicates.

Related questions

Open firewall port on CentOS 7

I am using CentOS 7 and I have to ensure that ports 2888 and 3888 are open. I read this article but this did not work because on CentOS 7 OS there is no iptables save command. Someone told me that the above URL …

Read More
How to grep a string in a directory and all its subdirectories?

How to grep a string or a text in a directory and all its subdirectories'files in LINUX ??

Read More
httpd: Could not reliably determine the server's fully qualified domain name, using 127.0.0.1 for ServerName

I tried to restart my Apache server on CentOS 5.0 and got this message: httpd: Could not reliably determine the server's fully qualified domain name, using 127.0.0.1 for ServerName Here is the /etc/hosts file: 127.0.0.1 server4-245 server4-245.com localhost.localdomain …

Read More